journal1 ›› 2014, Vol. 29 ›› Issue (3): 74-80. doi: 10.7668/hbnxb.2014.03.015

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Optimization of the cDNA-AFLP System of Castor Seed

CHEN Xiao-feng1,2, HUANG Feng-lan1,2, LI Guo-rui1,2, WANG Wen-yue1,2, ZHANG Zhi-yong3,4, BAO Chun-guang3,4, WU Chun-tao1, ZHANG Xian-shi1   

  1. 1. College of Life Science, Inner Mongolia University for Nationalities, Tongliao 028000, China;
    2. Inner Mongolia Industrial Engineering Research Center of Universities for Castor, Tongliao 028000, China;
    3. College of Agriculture, Inner Mongolia University for Nationalities, Tongliao 028000, China;
    4. Tongliao Academy of Agricultural Science, Tongliao 028015, China
  • Received:2014-03-12 Published:2014-06-28

Abstract: Castor is one of the most important oil crops with high economic value.In this work, the cDNA-AFLP system of castor seed was established and optimized to lay a foundation of research fatty acid gene expression in different castor materials or different developmental stages.The main results were as follows:total RNA was extracted and then reversed transcription into cDNA.cDNA digested with EcoR Ⅰ and Mse Ⅰ was joined with EcoR Ⅰ and Mse Ⅰ joint.The jointing products diluted by ddH2O according to the ratio of 1∶ 40 were used in pre-amplification.And the optimized selective amplification system was performed with 10×PCR Buffer 2.0 μL、dNTPs(10 mmol/L) 1.4 μL、Mg2+ (25 mmol/L) 1.4 μL, jointing product 1.0 μL, Ex primer(50 pmol/μL) 1.2 μL, My primer(50 pmol/μL) 1.2 μL, LA Taq(5 U/μL) 0.2 μL、ddH2O 11.6 μL.With the optimized PCR reaction system, we estimated 256 primer combinations with SDS-PAGE and gained 10 combinations which were suitable for cDNA-AFLP analysis of castor seed.

Key words: Castor, Fatty acid, cDNA-AFLP

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Cite this article

CHEN Xiao-feng, HUANG Feng-lan, LI Guo-rui, WANG Wen-yue, ZHANG Zhi-yong, BAO Chun-guang, WU Chun-tao, ZHANG Xian-shi. Optimization of the cDNA-AFLP System of Castor Seed[J]. journal1, 2014, 29(3): 74-80. doi: 10.7668/hbnxb.2014.03.015.

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