ACTA AGRICULTURAE BOREALI-SINICA ›› 2013, Vol. 28 ›› Issue (5): 74-79. doi: 10.7668/hbnxb.2013.05.013

Special Issue: Animal husbandry Biotechnology

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Isolation and Identification of Porcine Transmissible Gastroenteritis Virus JS2012 Strain and Clone and Sequence Analysis of Its S Complete Genome

GUO Rong-li, NI Yan-xiu, WEN Li-bin, LI Bin, WANG Xiao-min, YU Zheng-yu, HE Kong-wang   

  1. Institute of Veterinary Medicine, Jiangsu Academy of Agriculture Sciences, Key Laboratory of Animal Diseases Diagnostic and Immunology, Ministry of Agriculture, Nanjing 210014, China
  • Received:2013-07-12 Published:2013-10-28

Abstract: By serial passaging on ST cells,a transmissible gastroenteritis virus (TGEV)strain(TGEV JS2012)was obtained from intestinal contents of died piglets with clinical diarrhea symptom. This virus was proved to be TGEV by RT-PCR,direct immunofluorescence and animal regression test. The S gene of TGEV JS2012 strain primary aassages (P1TS)and the fiftith passages(P50TS),were amplified by PCR and then sequenced. Comparison of the S gene se-quences of P1TS and P50TS with 18 published TGEV strains with different origins showed that they can share 96.0%-99.9%homology of nucleotide sequences and 96. 5%-99. 9%homology of amino acids. Furthermore,the results of the phylogenetic tree analysis demonstrated that there was a close genetic relationship between P 1 TS strain and HN2002 or Miller M6 strain isolated from China and America respectively. Generally the result indicated the varia-tion of S gene between strains of different origins was not so obvious. The result also showed that a deletion of six bases happened in 1 124-1 129 location of the S gene of P50TS seemed to be similar to Purdue P115 strain which is an attenuated strain,indicating this deletion perhaps is related to the reduced virulence of TGEV.

Key words: TGEV, Isolation and identification, S Complete genome, Sequence analysis, Deletion

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Cite this article

GUO Rong-li, NI Yan-xiu, WEN Li-bin, LI Bin, WANG Xiao-min, YU Zheng-yu, HE Kong-wang. Isolation and Identification of Porcine Transmissible Gastroenteritis Virus JS2012 Strain and Clone and Sequence Analysis of Its S Complete Genome[J]. ACTA AGRICULTURAE BOREALI-SINICA, 2013, 28(5): 74-79. doi: 10.7668/hbnxb.2013.05.013.

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