PolymoRphisms of SCD1 Gene and Its Association with Meat Quality TRaits in Chinese Simmental

doi:10.3969/j.issn.1000-7091.2013.01.010

Abstract

Abstract: PolymoRphisms of SCD1 gene and its association with meat quality tRaits in 484 Chinese Simmentals weRe investigated by Illumina HD SNP CHIP． The Results suggested that seven SNPs weRe found and no loci A239V was detected in SCD1 gene． ThRee SNPs locus -A8605G，A9229G and A10050C weRe detected in the fouRth intRon of SCD1，a SNP loci-A12304G was found in the fifth intRon of SCD1 and thRee SNPs locus-A13655G，C14790T and A15565G weRe found in 3'UTR． The B allele of A8605G loci was advantage allele with a fRequency of 0． 748，and the fRequencies of otheRs weRe in a Range of 0． 4 - 0． 6． Chi-squaRe test Results showed that all SNPs locus of the SCD1 gene weRe in HaRdy-WeinbeRg balance( P ＞ 0． 05) ． All seven SNPs locus of the SCD1 gene weRe with modeRate polymoRphism，and the heteRozygosity and effective numbeR of alleles weRe high． The association analysis between the SNPs of SCD1 gene and some meat quality tRaits showed that SCD1 gene could be a candidate gene affecting intRamusculaR fat content， sheaR foRce，maRbling level and fat coloR to impRove the quality of beef in MAS．

Key words: Chinese Simmental, SCD1, SNP, Meat quality tRaits, Association analysis

CLC Number:

S823

ZHANG Jing-jing, SONG Yu-qin, LI Zhen, ZHU Yan-fei, ZHANG Ting-Rong. PolymoRphisms of SCD1 Gene and Its Association with Meat Quality TRaits in Chinese Simmental[J]. ACTA AGRICULTURAE BOREALI-SINICA, 2013, 28(1): 54-57. doi: 10.3969/j.issn.1000-7091.2013.01.010.

/ / Recommend / Download Citations

URL: http://www.hbnxb.net/EN/10.3969/j.issn.1000-7091.2013.01.010

http://www.hbnxb.net/EN/Y2013/V28/I1/54

References

[1] DobRzyn A，DobRzyn P． SteaRoyl-CoA desatuRase-a new playeR in skeletal muscle metabolism Regulation[J]． J Physiol PhaRmacol， 2006， 57( 10) : 31 - 42．

[2] Moioli B，ContaRini G，Avalli A， et al． ShoRt communication: Effect of steaRoyl coenzyme A desatuRase polymoRphism on fatty acid composition of milk [J]． J DaiRy Sci， 2007， 90( 7) : 3553 - 3558．

[3] Ntambi J M，BuhRow S A，KaestneR K H， et al． DiffeRentiation- induced gene expRession in 3T3-Ll pReadipocytes． ChaRacteRization of a diffeRentially expRessed gene encoding steaRoyl-CoA desatuRase[J]． JouRnal of Biological ChemistRy， 1988， 263( 33) : 17291 - 17300．

[4] BaRton L，Kott T，BuRes D，et al． The polymoRphisms of steaRoyl-CoA desatuRase ( SCD1) and steRol RegulatoRy element binding pRotein-1( SREBP-1) genes and theiR association with the fatty acid pRofile of muscle and subcutaneous fat in Fleckvieh bulls[J]． Meat Sci， 2010， 85( 1) : 15 -20．

[5] Milanesi E，Nicoloso L，CRepaldi P． SteaRoyl CoA desatuRase( SCD) gene polymoRphism in Italian cattle bReeds
[J]． J Anim BReed Genet， 2008， 125( 1) : 63 - 67．

[6] Schennink A，Heck J M，Bovenhuis H，et al． Milk fatty acid unsatuRation: genetic paRameteRs and effects of steaRoyl-CoA desatuRase( SCD1) and acyl CoA: diacylglyceRol acyltRansfeRase 1 ( DGAT1) [J]． J DaiRy Sci，2008， 91: 2135 - 2143．

[7] 王小龙，陈仁金，杨章平，等，中国荷斯坦牛SCD1 基因多态性与泌乳性状的关联分析[J]．畜牧兽医学报， 2011， 42( 7) : 1022 - 1026．

[8] 张立敏，张猛，周正奎，等，基于高密度SNP 芯片技术对中国西门塔尔牛SCD1 基因与肉质性状的相关性分析[J]．畜牧兽医学报， 2012， 43( 6) : 878 - 886．

[9] Taniguchi M，Utsugi T，Oyama K，et al． Genotype of steaRoyl-CoA desatuRase is associated with fatty acid composition in Japanese Black Cattle [J]． Mamm Genome， 2004， 14: 142 - 148．

[10] ORR L，Cifuni G F，PiasentieR E， et al． Association analyses of single nucleotide polymoRphisms in the LEP and SCD1 genes on the fatty acid pRofile of muscle fat in Simmental bulls[J]． Meat Sci， 2011， 87( 4) : 344 - 348．

[11] Zhang S． Association of genetic vaRiation to healthfulness of beef[R]． Iowa State UniveRsity Animal IndustRy RepoR， 2005． www． ans． iastate． edu．

[1]	FU Yanfeng, ZHAO Weimin, LI Hui, LI Bixia, CHENG Jinhua, XU Xiaobo, REN Shouwen. Genome Wide Association Analysis of Litter Size in Pigs [J]. Acta Agriculturae Boreali-Sinica, 2022, 37(4): 232-238.
[2]	SHI Fengyun, ZHU Guangqin, LIAO Yunqiong, WANG Bing. *Correlation Analysis of IGFBP-3* Gene Nucleotide Variation and Ovine Slaughter Traits** [J]. ACTA AGRICULTURAE BOREALI-SINICA, 2021, 36(S1): 368-372.
[3]	GAO Qian, FENG Yan, YANG Yahua, ZHAO Qingsong, LEI Yakun, LIU Bingqiang, ZHANG Mengchen, SHI Xiaolei, YANG Chunyan. Detecting QTL Underlying Wild Soybean Protein Content Through Genome Wide Association Study [J]. ACTA AGRICULTURAE BOREALI-SINICA, 2021, 36(S1): 23-30.
[4]	GUO Yuhuan, YAMAMOTO Naoki, PENG Zhengsong, LIAO Mingli, WEI Shuhong, WU Yichao, YANG Zaijun. Mining SNP/InDel Loci in Three Pistils Wheat Based on Transcriptome Data [J]. ACTA AGRICULTURAE BOREALI-SINICA, 2021, 36(5): 35-42.
[5]	WANG Zhenshan, YUAN Xilei, YAN Liuyan, YANG Pengjuan, SANG Luman, JIA Xiaoping, BAI Junyan. *Expression of SiCCT* Gene and Its Association Analysis with Main Agronomic Traits in Foxtail Millet** [J]. ACTA AGRICULTURAE BOREALI-SINICA, 2021, 36(5): 43-49.
[6]	GAO Guangliang, ZHANG Keshan, XU Guoyang, ZHAO Xianzhi, CHEN Zhuping, ZHOU Li, WANG Qigui. *Correlation Study on Polymorphism of GnIH* with Egg-Laying Traits and Body Measurement Traits in Goose** [J]. ACTA AGRICULTURAE BOREALI-SINICA, 2021, 36(5): 204-210.
[7]	YI Liuxi, SA Rula, WANG Shuyan, LI Zhiwei, SIQIN Bateer, LI Qiang. SSR Correlation Analysis of Linseed Lignan Content [J]. ACTA AGRICULTURAE BOREALI-SINICA, 2021, 36(1): 63-70.
[8]	ZHANG Jiukun, QI Yangyang, LI Lizhu, NING Xiaoshuang, LIU Zhihua, JIANG Zhenfeng, LI Wenbin. Genome-wide Mapping of QTLs and Candidate Genes Underlying Plant Height in Soybean Using BSA Method [J]. ACTA AGRICULTURAE BOREALI-SINICA, 2020, 35(S1): 1-10.
[9]	DONG Hui, YANG Li, LI Li, ZHANG Jianjun, FAN Jingfang, SONG Shijia, YANG Lei, LI Haishan. High Density Genetic Map of Cultivated Strawberry by SLAF-seq [J]. ACTA AGRICULTURAE BOREALI-SINICA, 2020, 35(6): 52-57.
[10]	WANG Hao, ZHANG Jian, WANG Jiafeng, YANG Guili, GUO Tao, CHEN Zhiqiang, WANG Hui. QTL Mapping and Candidate Gene Analysis of Rice Grain Weight Based on QTL-seq [J]. ACTA AGRICULTURAE BOREALI-SINICA, 2020, 35(2): 18-28.
[11]	ZHANG Yu, Francois Belzile. *Genome-wide Association Study for Sclerotinia sclerotiorum* Resistance of Soybean** [J]. ACTA AGRICULTURAE BOREALI-SINICA, 2020, 35(1): 205-213.
[12]	WANG Xiangyin, SUN Liangyu, LIU Jing, XIAO Rong. Mining and Functional Analyzing of SNP Related to Temperature Stress in Transcriptome of Pardosa pseudoannulata [J]. ACTA AGRICULTURAE BOREALI-SINICA, 2019, 34(S1): 331-339.
[13]	LIN Jing, ZHAO Qingsong, ZHANG Mengchen, YANG Chunyan, ZHAO Tuanjie. Rapid Mining Genetic Locus for Controlling Target Traits Using Next-generation Sequencing (NGS) [J]. ACTA AGRICULTURAE BOREALI-SINICA, 2019, 34(6): 47-53.
[14]	SONG Shanshan, LIU Zongyue, CONG Bo, LIU Linling, SONG Xingchao, PENG Yinghua. *SNPs Detection of IGF-1R* Gene and Its Association with Growth Traits in Mink** [J]. ACTA AGRICULTURAE BOREALI-SINICA, 2019, 34(4): 231-238.
[15]	JIA Xiaoping, ZHANG Bo, QUAN Jianzhang, LI Jianfeng, WANG Yongfang, YUAN Xilei. Genome-wide Association Analysis of Plant Height in Foxtail Millet under Different Photoperiod Conditions [J]. ACTA AGRICULTURAE BOREALI-SINICA, 2019, 34(4): 16-23.

Please choose a citation manager

Content to export