华北农学报 ›› 2017, Vol. 32 ›› Issue (2): 124-130. doi: 10.7668/hbnxb.2017.02.019

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采用AFLP和SSR标记对扁蓿豆遗传多样性进行比较分析

李鸿雁1, 卢新雄2, 辛霞2, 李志勇1, 李俊1, 黄帆1, 刘磊1   

  1. 1. 中国农业科学院 草原研究所, 农业部沙尔沁牧草资源重点野外科学观测试验站, 内蒙古 呼和浩特 010010;
    2. 中国农业科学院 作物科学研究所, 北京 100081
  • 收稿日期:2017-01-20 出版日期:2017-04-28
  • 通讯作者: 李志勇(1965-),男,内蒙古乌兰察布人,研究员,博士,主要从事牧草种质资源保存与创新利用研究。
  • 作者简介:李鸿雁(1964-),女,辽宁锦州人,研究员,博士,主要从事牧草种质资源保存、鉴定、评价与创新利用研究。
  • 基金资助:
    “十二五”农村领域国家科技计划课题(2013BAD01B0105);农作物种质资源保护项目(2016NWB037)

Comparative Analysis of Genetic Diversity of Medicago ruthenica (L.) in China Using AFLP and SSR Markers

LI Hongyan1, LU Xinxiong2, XIN Xia2, LI Zhiyong1, LI Jun1, HUANG Fan1, LIU Lei1   

  1. 1. Institute of Grassland Research, Chinese Academy of Agricultural Sciences, Shaerqin Key Wild Scientific Monitoring Station for Forage Resources of Ministry of Agriculture, Huhhot 010010, China;
    2. Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing 100081, China
  • Received:2017-01-20 Published:2017-04-28
  • Supported by:
    This study was supported by the National Key Technology R&D Program(No.2013BAD01B0105),the Ministry of Agriculture,Crop Germplasm Resources Protection and Utilization Project(2015NWB037).

摘要: 为了筛选出优异的扁蓿豆育种新材料,本研究采用AFLP和SSR分子标记技术对来自于中国7个省市自治区的15份扁蓿豆种质资源进行遗传多样性的比较分析,结果表明:18对SSR引物扩增出109个多态位点,8个AFLP引物组合扩增出640条带,其中472条多态带。AFLP标记的平均Nei's遗传多样性指数、Shannon多样性指数和遗传分化系数均高于SSR标记。15份扁蓿豆种质的遗传距离和遗传相似系数与地理类群很接近。AFLP和SSR数据的聚类分析显示:15份扁蓿豆种质分为4大类,但是聚类结果与地理类群不完全相符,主成分结果与聚类结果相似,Mantel检测表明:AFLP和SSR数据有较高的显著相关性,AFLP和SSR标记能够有效地对扁蓿豆进行遗传多样性分析,其结果为扁蓿豆育种和资源保护具有指导意义。

关键词: 扁蓿豆, 遗传多样性, AFLP, SSR

Abstract: In order to select new breeding materials of Ruthenia Medic with outstanding.In this study,we used AFLP and SSR markers to investigate the genetic diversity in 15 wild Ruthenia Medic accessions from Seven provinces and autonomous regions of China.A total of 109 alleles were detected using 18 pairs of SSR primers,and 640 bands containing 472 polymorphic bands were revealed using 8 pairs of AFLP primers.The mean Nei's gene diversity,Shannon's information index and genetic differentiation coefficient obtained by AFLP were higher than those obtained by SSR.The genetic distances and similarities among the 15 wild accessions demonstrated their close phylogenetic relationship.Dendrograms with arithmetic average based on both AFLP and SSR data clustering showed that the 15 accessions could be grouped into four main clusters.However,the order of clustering did not completely agree with the geographical distribution.A similar clustering pattern was obtained using principal coordinate analysis.The Mantel test identified a highly significant correlation of the AFLP and SSR data.Thus,combined AFLP and SSR more efficiently estimated and validated the genetic diversity of the Ruthenia Medic accessions.These results can aid the formulation of breeding and germplasm conservation strategies for Ruthenia Medic.

Key words: M. ruthenica, Genetic diversity, AFLP, SSR

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引用本文

李鸿雁, 卢新雄, 辛霞, 李志勇, 李俊, 黄帆, 刘磊. 采用AFLP和SSR标记对扁蓿豆遗传多样性进行比较分析[J]. 华北农学报, 2017, 32(2): 124-130. doi: 10.7668/hbnxb.2017.02.019.

LI Hongyan, LU Xinxiong, XIN Xia, LI Zhiyong, LI Jun, HUANG Fan, LIU Lei. Comparative Analysis of Genetic Diversity of Medicago ruthenica (L.) in China Using AFLP and SSR Markers[J]. ACTA AGRICULTURAE BOREALI-SINICA, 2017, 32(2): 124-130. doi: 10.7668/hbnxb.2017.02.019.

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