华北农学报 ›› 2013, Vol. 28 ›› Issue (S1): 91-96. doi: 10.7668/hbnxb.2013.S1.018

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基于EST-SSR标记的云南大茶树遗传多样性分析

周萌1,2, 李友勇1,2, 孙雪梅1,2, 王家金1,2, 谢瑾1,2, 成浩3, 汪云刚1,2, 刘本英1,2   

  1. 1. 云南省农科院茶叶研究所, 云南勐海, 666201;
    2. 云南省茶树种质资源创新与配套栽培技术工程研究中心, 云南勐海, 666201;
    3. 中国农业科学院茶叶研究所, 浙江杭州, 310008
  • 收稿日期:2013-07-23 出版日期:2013-12-31
  • 通讯作者: 刘本英(1972- ),男,湖南怀化人,研究员,博士,主要从事茶树种质资源、品种改良及分子生物学等领域研究.
  • 作者简介:司萌(1989- ),男,云南昆明人,研究实习员,本科,主要从事茶树资源、品种选育研究.周萌、李友勇为同等贡献作者.
  • 基金资助:
    国家自然科学基金项目(31160175);农业部农作物种质资源保护与利用项目(NB2012-2130135);云南省科技创新人才计划项目(2011CI068);国家茶叶现代产业技术体系建设项目(NYCYTX-23);云南省农业科学院院专项(YAAS2012ZY002)

Genetic Diversity Assessment of Ancient Tea Plants in Yunnan Province of China Revealed by EST-SSR Markers

ZHOU Meng1,2, LI You-yong1,2, SUN Xue-mei1,2, WANG Jia-jin1,2, XIE Jin1,2, CHENG Hao3, WANG Yun-gang1,2, LIU Ben-ying1,2   

  1. 1. Tea Research Institute, Yunnan Academy of Agricultural Sciences, Menghai 666201, China;
    2. Yunnan Technology Engineering Research Center of Tea Germplasm Innovation and Supporting Cultivation, Menghai 666201, China;
    3. Tea Research Institute, Chinese Academy of Agricultural Science, Hangzhou 310008, China
  • Received:2013-07-23 Published:2013-12-31

摘要: 应用EST-SSR标记技术对云南省不同区域采集的39份古茶树资源进行了遗传多样性和亲缘关系研究。结果表明:43对EST-SSR引物共扩增出121条多态性谱带,有效等位基因变异占比重的73.88%。多态性信息量PIC值为0.05~0.74,平均为0.469。基因多样性指数平均值为0.53,Shannon指数平均值为0.81,均高于0.5。遗传相似系数0.41~0.91,平均值为0.65,显示云南大茶树的遗传基础相对比较宽,具有较高的遗传多样性水平。SSR聚类分析表明,大茶树的遗传距离和亲缘关系与地理分布有一定的关系,在分子水平上显示了部分云南大茶树的亲缘关系,有助于今后野生大茶树的保护及利用研究。

关键词: 茶树, EST-SSR, 遗传多样性, 亲缘关系

Abstract: The genetic diversity and relationship of 39 ancient tea varieties gathered in different areas in Yunnan were analyzed by EST SSR markers. The results showed that total 121 alleles were amplified,and effective number of alleles was 73 .88 %.The polymorphism information content (PIC) was ranging from 0. OS to 0. 74 with the average of 0. 469. The average genetic diversity and the average Shannon's information index were 0. 55 and 0. 81 respectively, which was higher than 0. 5. The Nei's original measures of genetic identity among those tea germplasms ranged from 0. 441 to 0. 907,with average of 0. 653,and this results indicated that the genetic basis among those tea germplasms was wide,and the level of genetic diversity within those ancient tea varieties was high. The cluster analysis based on SSR markers revealed that the genetic distance and the genetic relationship within most of those varieties were related by its geographic source. The genetic relationship of all 39 ancient tea plants revealed by SSR dendrogram would be greatly helpful for the protection and utilization research on wild ancient tea varieties in the future.

Key words: Tea plant, EST SSR, Genetic diversity, Genetic relationship

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引用本文

周萌, 李友勇, 孙雪梅, 王家金, 谢瑾, 成浩, 汪云刚, 刘本英. 基于EST-SSR标记的云南大茶树遗传多样性分析[J]. 华北农学报, 2013, 28(S1): 91-96. doi: 10.7668/hbnxb.2013.S1.018.

ZHOU Meng, LI You-yong, SUN Xue-mei, WANG Jia-jin, XIE Jin, CHENG Hao, WANG Yun-gang, LIU Ben-ying. Genetic Diversity Assessment of Ancient Tea Plants in Yunnan Province of China Revealed by EST-SSR Markers[J]. ACTA AGRICULTURAE BOREALI-SINICA, 2013, 28(S1): 91-96. doi: 10.7668/hbnxb.2013.S1.018.

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