华北农学报 ›› 2013, Vol. 28 ›› Issue (5): 74-79. doi: 10.7668/hbnxb.2013.05.013

所属专题: 畜牧 生物技术

• 论文 • 上一篇    下一篇

猪传染性胃肠炎病毒江苏株的分离与鉴定及其S基因序列分析

郭容利, 倪艳秀, 温立斌, 李彬, 王小敏, 俞正玉, 何孔旺   

  1. 江苏省农业科学院兽医研究所 农业部兽用生物制品工程技术重点实验室 江苏 南京 210014
  • 收稿日期:2013-07-12 出版日期:2013-10-28
  • 通讯作者: 何孔旺(1963-),男,安徽枞阳人,研究员,博士,主要从事人兽共患病原和重大家畜疾病的研究。
  • 作者简介:郭容利(1974-),女,湖北天门人,硕士,助理研究员,主要从事动物疫病防控研究。
  • 基金资助:
    江苏省农业科技自主创新资金项目(CX(12)3076)

Isolation and Identification of Porcine Transmissible Gastroenteritis Virus JS2012 Strain and Clone and Sequence Analysis of Its S Complete Genome

GUO Rong-li, NI Yan-xiu, WEN Li-bin, LI Bin, WANG Xiao-min, YU Zheng-yu, HE Kong-wang   

  1. Institute of Veterinary Medicine, Jiangsu Academy of Agriculture Sciences, Key Laboratory of Animal Diseases Diagnostic and Immunology, Ministry of Agriculture, Nanjing 210014, China
  • Received:2013-07-12 Published:2013-10-28

摘要: 应用ST细胞,从临床上表现为腹泻症状的病死仔猪肠内容物中分离得到一株病毒,并对该病毒进行RTPCR,直接免疫荧光与动物回归等试验,证实该病毒为猪传染性胃肠炎病毒(TGEV),命名为JS2012株。应用PCR方法克隆出其初代(P1TS)与50代(P50TS)的S基因片段,进行序列测定,并将该基因序列与已发表的18个不同来源的TGEV毒株进行同源性和亲缘关系的比较分析。结果表明,各毒株间核苷酸同源性为96.0%~99.9%,氨基酸的同源性为96.5%~99.9%。TGEVJS201PITS株与中国江苏省HN2002株和美国Miller M6亲缘较近,表明不同地区分离毒株的S基因差异不大,而与P1TS相比,P50TS的S基因在1 124~1 129位置有6个碱基的缺失,对比发现,这种变异接近于弱毒株Purdue P115株所发生的变异,提示所发生的缺失可能与病毒毒力的减弱相关。

关键词: TGEV, 分离鉴定, S基因, 序列分析, 缺失

Abstract: By serial passaging on ST cells,a transmissible gastroenteritis virus (TGEV)strain(TGEV JS2012)was obtained from intestinal contents of died piglets with clinical diarrhea symptom. This virus was proved to be TGEV by RT-PCR,direct immunofluorescence and animal regression test. The S gene of TGEV JS2012 strain primary aassages (P1TS)and the fiftith passages(P50TS),were amplified by PCR and then sequenced. Comparison of the S gene se-quences of P1TS and P50TS with 18 published TGEV strains with different origins showed that they can share 96.0%-99.9%homology of nucleotide sequences and 96. 5%-99. 9%homology of amino acids. Furthermore,the results of the phylogenetic tree analysis demonstrated that there was a close genetic relationship between P 1 TS strain and HN2002 or Miller M6 strain isolated from China and America respectively. Generally the result indicated the varia-tion of S gene between strains of different origins was not so obvious. The result also showed that a deletion of six bases happened in 1 124-1 129 location of the S gene of P50TS seemed to be similar to Purdue P115 strain which is an attenuated strain,indicating this deletion perhaps is related to the reduced virulence of TGEV.

Key words: TGEV, Isolation and identification, S Complete genome, Sequence analysis, Deletion

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引用本文

郭容利, 倪艳秀, 温立斌, 李彬, 王小敏, 俞正玉, 何孔旺. 猪传染性胃肠炎病毒江苏株的分离与鉴定及其S基因序列分析[J]. 华北农学报, 2013, 28(5): 74-79. doi: 10.7668/hbnxb.2013.05.013.

GUO Rong-li, NI Yan-xiu, WEN Li-bin, LI Bin, WANG Xiao-min, YU Zheng-yu, HE Kong-wang. Isolation and Identification of Porcine Transmissible Gastroenteritis Virus JS2012 Strain and Clone and Sequence Analysis of Its S Complete Genome[J]. ACTA AGRICULTURAE BOREALI-SINICA, 2013, 28(5): 74-79. doi: 10.7668/hbnxb.2013.05.013.

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