华北农学报 ›› 2013, Vol. 28 ›› Issue (4): 204-207. doi: 10.3969/j.issn.1000-7091.2013.04.037

所属专题: 油料作物

• 论文 • 上一篇    下一篇

油菜黑胫病菌ISSR-PCR反应体系优化

郝丽芬1,2, 宋培玲1,2, 李子钦1, 李欣洲1,2, 张键1,3, 包玉英2   

  1. 1. 内蒙古农牧业科学院植物保护研究所, 内蒙古 呼和浩特 010031;
    2. 内蒙古大学生命科学学院, 内蒙古 呼和浩特 010021;
    3. 内蒙古农业大学农学院, 内蒙古 呼和浩特 010018
  • 收稿日期:2013-05-16 出版日期:2013-08-28
  • 通讯作者: 李子钦(1963- ),男,内蒙古鄂尔多斯人,研究员,博士,主要从事油料作物病理学研究 包玉英(1963- ),女,内蒙古通辽人,教授,博士生导师,主要从事植物学研究
  • 作者简介:郝丽芬(1987- ),女,内蒙古鄂尔多斯人,硕士研究生,主要从事植物病理学研究
  • 基金资助:
    国家科技支撑项目(2010BAD01B04);内蒙古创新基金项目(NMGCX201203);内蒙古科技创新平台建设(NMGKJHZ2012001)

Optimization for ISSR- PCR Reaction System on Leptosphaeria biglobosa

HAO Li-fen1,2, SONG Pei-ling1,2, LI Zi-qin1, LI Xin-zhou1,2, ZHANG Jian1,3, Bao Yu-ying2   

  1. 1. Plant Protection Institute, Inner Mongolia Academy of Agricultural & Animal Sciences, Huhhot 010031, China;
    2. College of Life Science, Inner Mongolia University, Huhhot 010021, China;
    3. Agricultural College, Inner Mongolia Agriculture University, Huhhot 010018, China
  • Received:2013-05-16 Published:2013-08-28

摘要: 通过正交试验设计,对油菜黑胫病菌ISSR-PCR反应体系的各影响因素进行研究,即从Taq酶、Mg2+、dNTPs、引物以及模板浓度5因素4水平进行优化,筛选并建立了适合油菜黑胫病菌ISSR分子标记的最佳反应体系,即在25μL反应体系中包含Taq DNA酶1 U,Mg2+2.0 mmol/L,dNTPs 0.2 mmol/L,引物0.6μmol/L,模板40 ng以及2.5μL 10×Buffer。并以扩增条带丰富、清晰、稳定性强为原则,从所查找的110条引物中筛选出24条适于油菜黑胫病菌ISSR-PCR扩增的引物,同时对各引物的最佳退火温度进行了筛选确定,经对20株病原菌的稳定性检测,证实该优化体系可用于研究该病原菌的遗传多样性。

关键词: 油菜黑胫病原菌, ISSR-PCR, 体系优化

Abstract: An orthogonal design was used to optimize ISSR reaction system for Leptosphaeria biglobosa on oil- seed rape in five factors(Taq polymerase,Mg2 +,dNTPs and the concentration of primer or template) at four levels. A suitable ISSR- PCR reaction system for Leptosphaeria biglobosa was established.The optimized reaction system consists of 1 U Taq DNA polymerase,2. 0 mmol /L Mg2 +,0. 2 mmol /L dNTPs,0. 6 mol /L primer,40 ng template DNA,and 2. 5 L 10 × Buffer.24 primers were selected for the abundant and clear band from 110 random primers and their optimal annealing temperature was decided.This optimization of ISSR- PCR reaction system can be used to study the genetic diversity of the pathogen which was confirmed by testing on the stability of 20 strains of Leptospha- eria biglobosa.

Key words: Leptosphaeria biglobosa, ISSR- PCR, Optimization reaction system

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引用本文

郝丽芬, 宋培玲, 李子钦, 李欣洲, 张键, 包玉英. 油菜黑胫病菌ISSR-PCR反应体系优化[J]. 华北农学报, 2013, 28(4): 204-207. doi: 10.3969/j.issn.1000-7091.2013.04.037.

HAO Li-fen, SONG Pei-ling, LI Zi-qin, LI Xin-zhou, ZHANG Jian, Bao Yu-ying. Optimization for ISSR- PCR Reaction System on Leptosphaeria biglobosa[J]. ACTA AGRICULTURAE BOREALI-SINICA, 2013, 28(4): 204-207. doi: 10.3969/j.issn.1000-7091.2013.04.037.

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