[1] Wang Q, Ellis P R.Oat beta-glucan:physico-chemical characteristics in relation to its blood-glucose and cholesterol-lowering properties[J].British Journal of Nutrition,2014,112(2):S4-S13.doi:10.1017/S0007114514002256. [2] 任顺成, 马瑞萍. 燕麦的功效因子及其保健功能[J]. 粮食科技与经济, 2013, 38(3):58-60. doi:10.16465/j.gste.2013.03.015. Ren S C, Ma R P. Efficacy factor and health care function of oat[J]. Grain Science and Technology and Economy, 2013,38(3):58-60. doi:10.16465/j.gste.2013.03.015. [3] Herranen M, Kariluoto S, Edelmann M, Piironenb V, Ahvenniemib K, Iivonenb V, Salovaarab H, Korhola M, et al.Isolation and characterization of folate-producing bacteria from oat bran and rye flakes[J].International Journal of Food Microbiology,2010,142(3):277-285. doi.org/10.1016/j.ijfoodmicro.2010.07.002. [4] 崔林, 杨才, 任长忠, 付晓峰, 张宗文, 乔治军, 范银燕, 刘根科, 韩美善, 刘龙龙. 燕麦育种技术基础研究及新品种选育[J]. 中国科技成果, 2014(10):21-23. doi:10.3772/j.issn.1009-5659.2014.10.009. Cui L, Yang C, Ren C Z, Fu X F, Zhang Z W, Qiao Z J, Fan Y Y, Liu G K, Han M S, Liu L L. Basic research on oat breeding technology and breeding of new varieties[J]. China Science and Technology Achievements, 2014(10):21-23. doi:10.3772/j.issn.1009-5659.2014.10.009. [5] Diederichsen A.Assessments of genetic diversity within a world collection of cultivated hexaploid oat (Avena sativa L.) based on qualitative morphological characters[J].Genetic Resources and Crop Evolution,2008,55(3):419-440.doi:10.1007/s10722-007-9249-y. [6] 徐微, 张宗文, 吴斌, 崔林. 裸燕麦种质资源AFLP标记遗传多样性分析[J]. 作物学报, 2009, 35(12):2205-2212. doi:10.3724/SP.J.1006.2009.02205. Xu W, Zhang Z W, Wu B, Cui L. Genetic diversity in naked oat (Avena nuda) germplasm revealed by AFLP markers[J]. Acta Agronomica Sinica, 2009, 35(12):2205-2212. doi:10.3724/SP.J.1006.2009.02205. [7] 王玉亭. 燕麦籽粒皮裸性基因遗传与分子作图[D]. 北京:中国农业科学院, 2011. Wang Y T. Genetic and molecular mapping of naked genes in oat seed skin[D]. Beijing:The Chinese Academy of Agricultural Sciences, 2011. [8] 吴斌, 张茜, 宋高原, 陈新, 张宗文. 裸燕麦SSR标记连锁群图谱的构建及β-葡聚糖含量QTL的定位[J]. 中国农业科学, 2014, 47(6):1208-1215. doi:10.3864/j.issn.0578-1752.2014.06.017. Wu B, Zhang Q, Song G Y, Chen X, Zhang Z W. Construction of SSR genetic linkage map and analysis of QTLs related to β-glucan content of naked oat(Avena nuda L.)[J]. Scientia Agricultura Sinica, 2014,47(6):1208-1215. doi:10.3864/j.issn.0578-1752.2014.06.017. [9] Moumouni K H, Kountche B A, Jean M, Hash C, Haussmann B, Belzile F. Construction of a genetic map for pearl millet, Pennisetum glaucum (L.) R. Br., using a genotyping-by-sequencing (GBS) approach[J].Molecular Breeding,2015,35(1):5.doi:10.1007/s11032-015-0212-x. [10] Lin M, Cai S, Wang S, Liu S, Zhang G, Bai G.Genotyping-by-sequencing (GBS) identified SNP tightly linked to QTL for pre-harvest sprouting resistance[J]. Theoretical and Applied Genetics,2015,128(7):1385-1395. doi:10.1007/s00122-015-2513-1. [11] Tumino G, Voorrips R E, Rizza F, Badeck F W, Morcia C, Ghizzoni R, Germeier C U, Paulo M J, Terzi V, Smulders M J. Population structure and genome-wide association analysis for frost tolerance in oat using continuous SNP array signal intensity ratios[J].Theoretical and Applied Genetics,2016,129(9):1711-1724.doi:10.1007/s00122-016-2734-y. [12] Nawaz M Y, Jimenez-Krassel F, Steibel J P, Lu Y, Baktula A, Vukasinovic N, Neuder L, Ireland J, Ireland J J, Tempelman R. Genomic heritability and genome-wide association analysis of anti-M llerian hormone in Holstein dairy heifers[J].Journal of Dairy Science,2018,101(9):1425-1430. doi:org/10.3168/jds.2018-14798. [13] Torkamaneh D, Laroche J, Belzile F.Genome-wide SNP calling from genotyping by sequencing(GBS) data:a comparison of seven pipelines and two sequencing technologies[J].PLoS One,2016,11(8):e0161333. doi:10.1371/journal.pone.0161333. [14] Peterson G W, Dong Y, Horbach C, Yong B F.Genotyping-by-sequencing for plant genetic diversity analysis:a Lab guide for SNP genotyping[J].Diversity,2014,6(4):665-680. doi:org/10.3390/d6040665. [15] Rasheed A, Hao Y F, Xia X C, Khan A A, Varshney R K, He Z H.Crop breeding chips and genotyping platforms:progress, challenges, and perspectives[J].Molecular Plant,2017,10(8):1047-1064.doi:10.1016/j.molp.2017.06.008. [16] Scheben A, Batley J, Edwards D. Genotyping-by-sequencing approaches to characterize crop genomes:choosing the right tool for the right application[J]. Plant biotechnology Journal, 2017, 15(2):149-161. doi:org/10.1111/pbi.12645. [17] Miller M R, Dunham J P, Amores A, Cresko W A, Johnson E A. Rapid and cost-effective polymorphism identification and genotyping using restriction site associated DNA(RAD) markers[J]. Genome Research, 2007,17(2), 240-248. doi:10.1101/gr.568120. [18] Wang S, Meyer E, Mckay J K, Matz M V.2b-RAD:a simple and flexible method for genome-wide genotyping[J].Nature Methods,2012,9(8):808.doi:10.1038/NMETH.2023. [19] Elshire R J, Glaubitz J C, Sun Q, Poland J A, Kawamoto K, Buckler E S, Mitchell S E.A robust, simple genotyping-by-sequencing (GBS) approach for high diversity species[J].PLoS One,2011,6(5):e19379.doi:10.1371/journal.pone.0019379. [20] Peterson B K, Weber J N, Kay E H, Fisher H S, Hoekstra H E.Double digest RADseq:an inexpensive method for De Novo SNP discovery and genotyping in model and Non-Model species[J].PLoS One,2012,7(5):0037135.doi:10.1371/journal.pone.0037135. [21] Sun X W, Liu D Y, Zhang X F, Li W A, Hong W G, Jiang C B, Guan N, Ma C X, Zeng H P, Xu C H, Song J, Huang L, Wang C M, Shi J J, Wang R, Zheng X A, Wang X W, Zheng H K.SLAF-seq:an efficient method of large-scale De Novo SNP discovery and genotyping using high-throughput sequencing[J].PLoS One,2013,8(3):0058700.doi:10.1371/journal.pone.e58700. [22] Alipour H, Bihamta M R, Mohammadi V A, Bai G H, Zhang G R. Genotyping-by-Sequencing (GBS) revealed molecular genetic diversity of iranian wheat landraces and cultivars[J].Frontiers in Plant Science,2017,8:01293.doi:10.3389/fpls.2017.01293. [23] Annicchiarico P, Nazzicari N, Wei Y L, Pecetti L, Brummer E C. Genotyping-by-sequencing and its exploitation for forage and cool-season grain legume breeding[J].Frontiers in Plant Science,2017,8:679.doi:10.3389/fpls.2017.00679. [24] Chang C W, Wang Y H, Tung C W.Genome-wide single nucleotide polymorphism discovery and the construction of a high-density genetic map for melon (Cucumis melo L.) using genotyping-by-sequencing[J].Frontiers in Plant Science,2017,8:125.doi:10.3389/fpls.2017.00125. [25] Ertiro B T, Semagn K, Das B, Olsen M, Labuschagne M, Worku M, Wegary D A, Ogugo V, Keno T, Abebe B A, Menkir A.Genetic variation and population structure of maize inbred lines adapted to the midaltitude sub-humid maize agro-ecology of Ethiopia using single nucleotide polymorphic (SNP) markers[J]. BMC Genomics,2017,18(1):777.doi:10.1186/s12864-017-4173-9. [26] Gouesnard B, Negro S, Laffray A, Glaubitz J, Melchinger A, Revilla P, Moreno-Gonzalez J, Madur D, Combes V, Tollon-Cordet C, Laborde J, Kermarrec D, Bauland C, Moreau L, Charcosset A, Nicolas S. Genotyping-by-sequencing highlights original diversity patterns within a European collection of 1191 maize flint lines, as compared to the maize USDA genebank[J].Theoretical and Applied Genetics,2017,130(10):2165-2189. doi:10.1007/s00122-017-2949-6. [27] Jo J, Purushotham P M, Han K, Lee H R, Nah G, Kang B C.Development of a genetic map for onion (Allium cepa L.) using reference-free genotyping-by-sequencing and SNP assays[J].Frontiers in Plant Science,2017,8:1606.doi:10.3389/fpls.2017.01606. [28] Kumar S, Kirk C, Deng C, Wiedow C. Genotyping-by-sequencing of pear (Pyrus spp.) accessions unravels novel patterns of genetic diversity and selection footprints[J]. Horticulture research, 2017, 4:17015. doi:10.1038/hortres.2017.15. [29] Malmberg M M, Pembleton L W, Baillie R C, Sudheesh S, Kaur S A, Verma P, Spangenberg G C, Forster J W, Cogan N O. Genotyping-by-sequencing through transcriptomics:implementation in a range of crop species with varying reproductive habits and ploidy levels[J].Plant Biotechnology Journal,2018,16(4):877-889.doi:10.1111/pbi.12835. [30] Otto L G, Mondal P, Brassac J, Preiss S, Degenhardt J, He S, Reif J C, Sharbel T F.Use of genotyping-by-sequencing to determine the genetic structure in the medicinal plant chamomile,and to identify flowering time and alpha-bisabolol associated SNP-loci by genome-wide association mapping[J].BMC Genomics,2017,18(1):599. doi:org/10.1186/s12864-017-3991-0. [31] Winkler L R, Bonman J M, Chao S A, Bockelman H, Klos K E.Population structure and genotype phenotype associations in a collection of oat landraces and historic cultivars[J].Frontiers in Plant Science,2016,7:1077.doi:10.3389/fpls.2016.1077. [32] Huang Y F, Poland J A, Wight C P, Jackson E W, Tinker N A.Using Genotyping-By-Sequencing (GBS) for genomic discovery in cultivated oat[J].PLoS One,2014,9(7):102448.doi:10.1371/journal.pone.0102448. [33] 刘龙龙, 张丽君, 马名川, 韩渊怀, 周建萍, 崔林. 山西省燕麦产业现状及发展趋势[J]. 山西农业大学学报(自然科学版), 2016, 36(12):905-907, 912. doi:10.13842/j.cnki.issn1671-8151.2016.12.012. Liu L L, Zhang L J, Ma M C, Han Y H, Zhou J P, Cui L. Current status and developing trend of oat industry in Shanxi[J]. Journal of Shanxi Agricultural University(Natural Science Edition), 2016,36(12):905-907, 912. doi:10.13842/j.cnki.issn1671-8151.2016.12.012. [34] Schubert M, Lindgreen S, Orlando L.Adapter Removal v2:rapid adapter trimming,identification,and read merging[J].BMC Research Notes,2016,9(1):88. doi:10.1186/s13104-016-1900-2. [35] Catchen J, Hohenlohe P A, Bassham S, Amores A, Cresko W A.Stacks:an analysis tool set for population genomics[J].Molecular Ecology,2013,22(11):3124-3140.doi:10.1111/mec.12354. [36] Owens D M, Keyse S M.Differential regulation of MAP kinase signalling by dual-specificity protein phosphatases[J].Oncogene,2007,26(22):3203-3213.doi:10.1038/sj.onc.1210412. [37] Aksaas A, Larsen A V, Rogne M, Rosendale K, Kvissel A K, Sk lhegg B S.G-patch domain and KOW motifs-containing protein,GPKOW;a nuclear RNA-binding protein regulated by protein kinase A[J].Journal of Molecular Signaling,2011,6(1):10. doi:10.1186/1750-2187-6-10. [38] Laloi C, Rayapuram N, Chartier Y, Rayapuram N, Chartier Y, Grienenberger J M, Bonnard J, Meyer Y.Identification and characterization of a mitochondrial thioredoxin system in plants[J].Proceedings of the National Academy of Sciences,2001,98(24):14144-14149. doi:10.1073/pnas.241340898 [39] Wang Y P, Nishimura M T, Zhao T, Tang D Z.ATG2, an autophagy-related protein, negatively affects powdery mildew resistance and mildew-induced cell death in Arabidopsis[J].Plant Journal,2011,68(1):74-87.doi:10.1111/j.1365-313X.2011.04669.x. [40] Colcombet J, Lopez-Obando M, Heurtevin L A, Martin K, Berthome R, Lurin C.Systematic study of subcellular localization of Arabidopsis PPR proteins confirms a massive targeting to organelles[J].RNA Biology,2013,10(9):1557-1575.doi:10.4161/rna.26128. [41] Ganie S A, Pani D R, Mondal T K.Genome-wide analysis of DUF221 domaincontaining gene family in Oryza species and identification of its salinity stress-responsive members in rice[J].PLoS One,2017,12(8):e0182469.doi:10.1371/journal.pone.0182469. [42] Banerjee A, Roychoudhury A. WRKY proteins:signaling and regulation of expression during abiotic stress responses[J]. The Scientific World Journal, 2015, 200:807560. doi:10.1155/2015/807560. [43] Gu X B, Gao Z H, Yan Y C, Wang X Y, Qiao Y S, Chen Y H.RdreB1BI enhances drought tolerance by activating AQP-related genes in transgenic strawberry[J].Plant Physiology and Biochemistry,2017,119:33-42.doi:10.1016/j.plaphy.2017.08.013. [44] Neale A D, Wahleithner J A, Lund M, Bonnett H T, Kelly A, Meeks-Wagner D R, Peacock W J, Dennis E S. Chitinase, beta-1,3-glucanase, osmotin, and extensin are expressed in tobacco explants during flower formation[J].The Plant Cell,1990,2(7):673-684.doi:10.1105/tpc.2.7.673. [45] Even Y, Bennett J L, Sekulovic S, Rossi F V.NUP98-HOXA10hd-expanded hematopoietic stem cells efficiently reconstitute bone marrow of mismatched recipients and induce tolerance[J].Cell Transplantation,2011,20(7):1099-1108. doi:10.3727/096368910X545068. [46] Robledo D, Palaiokostas C, Bargelloni L, Mart nez P, Houston R.Applications of genotyping by sequencing in aquaculture breeding and genetics[J].Reviews in Aquaculture,2018,10(3):670-682. doi:org/10.1111/raq.12193. [47] Crossa J, Pérez P,de los campos G,Muhuku G,Dreisigacker S,Magorokosho C.Genomic selection and prediction in plant breeding[J].Journal of Crop Improvement,2011,25(3):239-261. doi:org/10.1080/15427528.2011.558767. [48] Makumburage G B, Richbourg H L, Latorre K D, Capps A, Chen C, Stapleton A E. Genotype to phenotype Maps:multiple input abiotic signals combine to produce growth effects via attenuating signaling interactions in maize[J].G3-Genes Genomes Genetics,2013,3(12):2195-2204.doi:10.1534/g3.113.008573. [49] Mcnally K L, Naredo M E, Cairns J.SNP discovery at candidate genes for drought responsiveness in rice[M].Drought Frontiers in Rice:Crop Improvement for Increased Rainfed Production,2009:311-324. doi:10.1142/9789814280013_0017. [50] Homolka A, Eder T, Kopecky D, Berenyi M, Burg K, Fluch S.Allele discovery of ten candidate drought-response genes in Austrian oak using a systematically informatics approach based on 454 amplicon sequencing[J].BMC Research Notes,2012,5(1):175. doi:10.1186/1756-0500-5-175. [51] Cortés A J, Monserrate F A, Ram rez-Villegas J, Madri n S, Blair M W.Drought tolerance in wild plant populations:the case of common beans(Phaseolus vulgaris L.)[J].PLoS One,2013,8(5):e62898. doi:org/10.1371/journal.pone.0062898. [52] Bhullar N K, Zhang Z Q, Wicker T, Keller B.Wheat gene bank accessions as a source of new alleles of the powdery mildew resistance gene Pm3:a large scale allele mining project[J].BMC Plant Biology,2010,10(88):1471-2229.doi:10.1186/1471-2229-10-88. [53] Cattivelli L, Rizza F, Badeck F W, Mazzucotelli E, Mastrangelo A M, Francia E, Mar C, Tondelli A, Stanca A M. Drought tolerance improvement in crop plants:An integrated view from breeding to genomics[J].Field Crops Research,2008,105(1/2):1-14.doi:10.1016/j.fcr.2007.07.004. [54] Abou-Elwafa S F.Identification of genes associated with drought tolerance in barley[J].Biologia Plantarum,2018,62(2):299-306.doi:10.1007/s10535-017-0765-0. [55] Mir R R, Zaman-Allah M, Sreenivasulu N, Trethowan R, Varshney R K.Integrated genomics,physiology and breeding approaches for improving drought tolerance in crops[J].Theoretical and Applied Genetics, 2012,125(4):625-645. doi:org/10.1007/s00122-012-1904-9. [56] Tubersora R, Salvi S.Genomics-based approaches to improve drought tolerance of crops[J].Trends in Plant Science,2006,11(8):405-412.doi:org/10.1016/j.tplants. 2006.06.003. [57] Lu G H, Wang X P, Liu J H, Yu K, Gao Y, Liu H Y, Wang C G, Wang W, Wang G A, Mao G F, Li B F, Qin J Y, Xia M, Zhou J L, Liu J M, Jiang S Q, Mo H A, Nagasawa N, Sivasankar S, Albertsen M C, Sakai H, Mazur B J, Lassner M W, Broglie R M. Application of T-DNA activation tagging to identify glutamate receptor-like genes that enhance drought tolerance in plants[J].Plant Cell Reports,2014,33(4):617-631. doi:10.1007/s00299-014-1586-7. [58] Casaretto J A, El-Kereamy A, Zeng B, Stiegelmeyer S M, Chen X, Yong M B, Rothstein S J.Expression of OsMYB55 in maize activates stress-responsive genes and enhances heat and drought tolerance[J].BMC Genomics,2016,17(1):312. doi:10.1186/s12864-016-2659-5. [59] Webster H, Keeble G, Dell B, Fosu-Nyarko J, Mukai Y, Moolhuijzen P, Bellgard M, Jia J Z, Kong X Y, Feuillet C, Choulet F, Appels R, Int wheat genome sequencing consor. Genome-level identification of cell wall invertase genes in wheat for the study of drought tolerance[J].Functional Plant Biology,2012,39(7):569-579.doi:10.1071/FP12083. [60] 段莹亮, 白洁. 硫氧还蛋白(Trx)及Trx80在免疫系统中的作用[J]. 免疫学杂志, 2009, 25(4):483-486. doi:10.13431/j.cnki.immunol.j.20090129. Duan Y L, Bai J. The role of thioredoxin(Trx) and Trx80 in the immune system[J]. Immunological Journal, 2009,25(4):483-486. doi:10.13431/j.cnki.immunol.j.20090129. [61] Cha J Y, Kim J Y, Jung I J, Kim M R, Alam S S, Yun D J, Lee S Y, Kim M G, Kim W Y.NADPH-dependent thioredoxin reductase A (NTRA) confers elevated tolerance to oxidative stress and drought[J].Plant Physiology and Biochemistry,2014,80:184-191. doi:10.1016/j.plaphy.2014.04.008. [62] Ozgur R, Uzilday B, Sekmen A H, Turkan I. Reactive oxygen species regulation and antioxidant defence in halophytes[J].Functional Plant Biology,2013,40(8/9, SI):832-847.doi:10.1071/FP12389. [63] Zhai C Z, Zhao L, Yin L J, Chen M, Wang Q Y, Li L C, Xu Z S, Ma Y Z. Two wheat glutathione peroxidase genes whose products are located in chloroplasts improve salt and H2O2 tolerances in Arabidopsis[J].PLoS One,2013,8(10):e73989. doi:10.1371/journal.pone.0073989. [64] 张帆, 蒋雷, 鞠丽萍, 金秀锋, 王轩, 张晓科, 王宏礼, 付晓洁. 一个普通小麦Trx超家族新基因TaNRX 的克隆与抗旱相关标记开发[J]. 作物学报, 2014, 40(1):29-36. doi:10.3724/SP.J.1006.2014.00029. Zhang F, Jiang L, Ju L P, Jin X F, Wang X, Zhang X K, Wang H L, Fu X J. Cloning a novel gene TaNRX of Trx superfamily and developing its molecular markers related to drought resistance in common wheat[J]. Acta Agronomica Sinica, 2014,40(1):29-36. doi:10.3724/SP.J.1006.2014.00029. [65] 张鹏钰, 袁珍, 王国瑞, 王同朝, 尹钧, 卫丽, 刘毓侠. 普通小麦Trx59 基因的克隆及功能验证[J]. 华北农学报, 2017, 32(5):1-6. doi:10.7668/hbnxb.2017.05.001. Zhang P Y, Yuan Z, Wang G R, Wang T C, Yin J, Wei L, Liu Y X. Cloning and functional verification of Trx59 gene in common wheat[J]. Acta Agriculturae Boreali-Sinica, 2017,32(5):1-6. doi:10.7668/hbnxb.2017.05.001. |